{ "_id": "6a1c03721d7bb097a0a29daa", "Package": "geex", "Type": "Package", "Title": "An API for M-Estimation", "Version": "1.1.1", "Authors@R": "c(person(\"Bradley\", \"Saul\", role = c(\"aut\", \"cre\"),\nemail = \"bradleysaul@gmail.com\"),\nperson(\"Brian\", \"Barkley\", role = c(\"ctb\")))", "Author": "Bradley Saul [aut, cre], Brian Barkley [ctb]", "Maintainer": "Bradley Saul ", "Description": "Provides a general, flexible framework for estimating\nparameters and empirical sandwich variance estimator from a set\nof unbiased estimating equations (i.e., M-estimation in the\nvein of Stefanski & Boos (2002)\n). All examples from Stefanski\n& Boos (2002) are published in the corresponding Journal of\nStatistical Software paper \"The Calculus of M-Estimation in R\nwith geex\" by Saul & Hudgens (2020)\n. Also provides an API to compute\nfinite-sample variance corrections.", "URL": "https://github.com/bsaul/geex, https://bsaul.github.io/geex/", "BugReports": "https://github.com/bsaul/geex/issues", "License": "MIT + file LICENSE", "LazyData": "TRUE", "VignetteBuilder": "knitr", "RoxygenNote": "7.2.1", "Encoding": "UTF-8", "Config/pak/sysreqs": "cmake make", "Repository": "https://bsaul.r-universe.dev", "Date/Publication": "2024-05-06 18:09:41 UTC", "RemoteUrl": "https://github.com/bsaul/geex", "RemoteRef": "HEAD", "RemoteSha": "2ef096f6e90aa6b298f67b0796be5eabbf46d543", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-31 09:42:55 UTC", "User": "root" }, "MD5sum": "fad53ec42e4ea14c2e414f6b1a2d53d2", "_user": "bsaul", "_type": "src", "_file": "geex_1.1.1.tar.gz", "_fileid": "de7ef2a789e1c70b4375887ea27970b8b9ad30bb805ace5cb94b6d27b2b378d3", "_filesize": 413493, "_sha256": "de7ef2a789e1c70b4375887ea27970b8b9ad30bb805ace5cb94b6d27b2b378d3", "_created": "2026-05-31T09:42:55.000Z", 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"title": "Creates a correct_control object", "topics": [ "correction" ] }, { "page": "create_basis", "title": "Creates an m_estimation_basis object", "topics": [ "create_basis" ] }, { "page": "create_GFUN-methods", "title": "Creates a function that sums over psi functions", "topics": [ "create_GFUN", "create_GFUN,m_estimation_basis,m_estimation_basis-method", "create_GFUN,m_estimation_basis-method" ] }, { "page": "create_psiFUN_list-methods", "title": "Creates list of psi functions", "topics": [ "create_psiFUN_list", "create_psiFUN_list,m_estimation_basis,m_estimation_basis-method", "create_psiFUN_list,m_estimation_basis-method" ] }, { "page": "deriv_control-class", "title": "deriv_control S4 class", "topics": [ "deriv_control-class" ] }, { "page": "diagnose_roots", "title": "Diagnose roots of estimating equations", "topics": [ "diagnose_roots" ] }, { "page": "estimate_GFUN_roots", "title": "Estimate roots for a set of estimating equations", "topics": [ "estimate_GFUN_roots" ] }, { "page": "estimate_sandwich_matrices", "title": "Estimate component matrices of the empirical sandwich covariance estimator", "topics": [ "estimate_sandwich_matrices" ] }, { "page": "estimating_function-class", "title": "estimating_function S4 class", "topics": [ "estimating_function-class" ] }, { "page": "fay_bias_correction", "title": "Correct sandwich variance estimator byFay's bias correction", "topics": [ "fay_bias_correction" ] }, { "page": "fay_df_correction", "title": "Correct sandwich variance inference by Fay's degrees of freedom correction", "topics": [ "fay_df_correction" ] }, { "page": "geex_control-class", "title": "geex_control S4 class", "topics": [ "geex_control-class" ] }, { "page": "geex_summary-class", "title": "geex summary object", "topics": [ "geex_summary-class" ] }, { "page": "geex-class", "title": "geex S4 class", "topics": [ "geex-class" ] }, { "page": "geexex", "title": "Dataset used to illustrate Stefanski and Boos examples.", "topics": [ "geexex" ] }, { "page": "get_corrections-methods", "title": "Gets the corrections from a geex object", "topics": [ "get_corrections", "get_corrections,geex-method", "get_corrections,geex_summary-method", "get_corrections,m_estimation_basis,m_estimation_basis-method" ] }, { "page": "grab", "title": "Grab something from an object", "topics": [ "grab" ] }, { "page": "grab_bread-methods", "title": "Grabs the .A (bread matrix) slot", "topics": [ "grab_bread", "grab_bread,sandwich_components,sandwich_components-method", "grab_bread,sandwich_components-method" ] }, { "page": "grab_bread_list-methods", "title": "Gets the .A_i (list of bread matrices) slot", "topics": [ "grab_bread_list", "grab_bread_list,sandwich_components,sandwich_components-method", "grab_bread_list,sandwich_components-method" ] }, { "page": "grab_design_levels", "title": "Grab a list of the levels of factor variables in a model.", "topics": [ "grab_design_levels" ] }, { "page": "grab_design_matrix", "title": "Grab a matrix of fixed effects from a model object", "topics": [ "grab_design_matrix" ] }, { "page": "grab_ee-methods", "title": "Gets the .ee_i (observed estimating function) slot", "topics": [ "grab_ee_list" ] }, { "page": "grab_estFUN-methods", "title": "Grab estimating functions from a model object", "topics": [ "grab_estFUN", "grab_estFUN,estimating_function,estimating_function-method", "grab_estFUN,estimating_function-method" ] }, { "page": "grab_fixed_formula", "title": "Grab the RHS formula from a model object", "topics": [ "grab_fixed_formula" ] }, { "page": "grab_GFUN-methods", "title": "Gets the .psi_list slot in a m_estimation_basis", "topics": [ "grab_GFUN", "grab_GFUN,geex,geex-method", "grab_GFUN,geex-method", "grab_GFUN,m_estimation_basis,m_estimation_basis-method", "grab_GFUN,m_estimation_basis-method" ] }, { "page": "grab_meat-methods", "title": "Gets the .B (meat matrix) slot", "topics": [ "grab_meat", "grab_meat,sandwich_components,sandwich_components-method", "grab_meat,sandwich_components-method" ] }, { "page": "grab_meat_list-methods", "title": "Gets the .B_i (list of bread matrices) slot", "topics": [ "grab_ee_list,sandwich_components-method", "grab_meat_list", "grab_meat_list,sandwich_components,sandwich_components-method", "grab_meat_list,sandwich_components-method" ] }, { "page": "grab_psiFUN", "title": "Grab estimating functions from a model object", "topics": [ "grab_psiFUN", "grab_psiFUN.geeglm", "grab_psiFUN.glm", "grab_psiFUN.merMod" ] }, { "page": "grab_psiFUN_list-methods", "title": "Gets the .psi_list slot in a m_estimation_basis", "topics": [ "grab_psiFUN_list", "grab_psiFUN_list,geex,geex-method", "grab_psiFUN_list,geex-method", "grab_psiFUN_list,m_estimation_basis,m_estimation_basis-method", "grab_psiFUN_list,m_estimation_basis-method" ] }, { "page": "grab_response", "title": "Grab a vector of responses from a model object", "topics": [ "grab_response" ] }, { "page": "grab_response_formula", "title": "Grab the LHS formula from a model object", "topics": [ "grab_response_formula" ] }, { "page": "m_estimate", "title": "Estimate parameters and their covariance from a set of estimating equations", "topics": [ "m_estimate" ] }, { "page": "m_estimation_basis-class", "title": "m_estimation_basis S4 class", "topics": [ "m_estimation_basis-class" ] }, { "page": "nobs-methods", "title": "Extract the number observations", "topics": [ "nobs,geex,geex-method", "nobs,geex-method", "nobs,geex_summary,geex_summary-method", "nobs,geex_summary-method" ] }, { "page": "root_control-class", "title": "root_control S4 class", "topics": [ "root_control-class" ] }, { "page": "roots-methods", "title": "Gets the parameter estimates matrix from a geex object", "topics": [ "roots", "roots,geex,geex-method", "roots,geex-method", "roots,geex_summary-method" ] }, { "page": "sandwich_components-class", "title": "sandwich_components S4 class", "topics": [ "sandwich_components-class" ] }, { "page": "setup_approx_control", "title": "Setup 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